Increasing biological complexity is positively correlated with the relative genome-wide expansion of non-protein-coding DNA sequences

Background: Prior to the current genomic era it was suggested that the number of protein-coding genes that an organism made use of was a valid measure of its complexity. It is now clear, however, that major incongruities exist and that there is only a weak relationship between biological complexity and the number of protein coding genes. For example, using the protein-coding gene number as a basis for evaluating biological complexity would make urochordates and insects less complex than nematodes, and humans less complex than rice. Results: We analyzed the ratio of noncoding to total genomic DNA (ncDNA/tgDNA) for 85 sequenced species and found that this ratio correlates well with increasing biological complexity. The ncDNA/tgDNA ratio is generally contained within the bandwidth of 0.05-0.24 for prokaryotes, but rises to 0.26-0.52 in unicellular eukaryotes, and to 0.62-0.985 for developmentally complex multicellular organisms. Significantly, prokaryotic species display a non-uniform species distribution approaching the mean of 0.1177 ncDNA/tgDNA (p=1.58 x 10^-13), and a nonlinear ncDNA/tgDNA relationship to genome size (r=0.15). Importantly, the ncDNA/tgDNA ratio corrects for ploidy, and is not substantially affected by variable loads of repetitive sequences. Conclusions: We suggest that the observed noncoding DNA increases and compositional patterns are primarily a function of increased information content. It is therefore possible that introns, intergenic sequences, repeat elements, and genomic DNA previously regarded as genetically inert may be far more important to the evolution and functional repertoire of complex organisms than has been previously appreciated.Comment: 25 pages, 2 figures, 1 tabl

Mechanism facilitates coating of inner surfaces of metal cylinders

Cylinder is rotated about shielded hot filament to vapor deposit thin coatings of aluminum or other metallic substances on the inner surface of a cylinder while avoiding heat-producing high-density current flow which causes outgassing of the coating surface. This method is acceptable for glass or metal

Applications of control theory

Applications of control theory are considered in the areas of decoupling and wake steering control of submersibles, a method of electrohydraulic conversion with no moving parts, and socio-economic system modelling

Mapping the Evolution of Optically-Generated Rotational Wavepackets in a Room Temperature Ensemble of D2_2

A coherent superposition of rotational states in D$_2$ has been excited by nonresonant ultrafast (12 femtosecond) intense (2 $\times$ 10$^{14}$ Wcm$^{-2}$) 800 nm laser pulses leading to impulsive dynamic alignment. Field-free evolution of this rotational wavepacket has been mapped to high temporal resolution by a time-delayed pulse, initiating rapid double ionization, which is highly sensitive to the angle of orientation of the molecular axis with respect to the polarization direction, $\theta$. The detailed fractional revivals of the neutral D$_2$ wavepacket as a function of $\theta$ and evolution time have been observed and modelled theoretically.Comment: 4 pages, 3 figures. Accepted for publication in Phys. Rev. A. Full reference to follow.

Controlling Silver Nanoparticle Size and Morphology with Photostimulated Synthesis

Photo-induced synthesis and control over the size and shape of colloidal silver nanoparticles is investigated in contrast to photo-stimulated aggregation of small nanoparticles into large fractal-type structures. The feasibility of light-driven nanoengineering which enables manipulation of the sizes and shapes of the isolated nanoparticles is studied by varying the amount and type of the stabilizing agent and the type of optical irradiation.Comment: 10 pages, 7 figures, 11 image

The Age of the Inner Halo Globular Cluster NGC 6652

HST (V,I) photometry has been obtained for the inner halo globular cluster NGC 6652. The photometry reaches approximately 4 mag below the turn-off and includes a well populated horizontal branch. This cluster is located close to the Galactic center at a galactocentric distance of approximately 2.0 kpc with a reddening of E(V-I) = 0.15 +/- 0.02 and has a metallicity of [Fe/H] approximately -0.85. Based upon Delta(V) between the point on the sub-giant branch which is 0.05 mag redder than the turn-off and the horizontal branch, NGC 6652 is 11.7 +/- 1.6 Gyr old. Using this same Delta(V), precise differential ages for 47 Tuc (a thick disk globular), M107 and NGC 1851 (both halo clusters) were obtained. NGC 6652 appears to be the same age as 47 Tuc and NGC 1851 (within +/- 1.2 Gyr), while there is a slight suggestion that M107 is older than NGC 6652 by 2.3 +/- 1.5 Gyr. As this is a less than 2-sigma result, this issue needs to be investigated further before a definitive statement regarding the relative age of M107 and NGC 6652 may be made.Comment: accepted for publication in the Astronomical Journal, December 2000 issu

New Perspectives in Sinographic Language Processing Through the Use of Character Structure

Chinese characters have a complex and hierarchical graphical structure carrying both semantic and phonetic information. We use this structure to enhance the text model and obtain better results in standard NLP operations. First of all, to tackle the problem of graphical variation we define allographic classes of characters. Next, the relation of inclusion of a subcharacter in a characters, provides us with a directed graph of allographic classes. We provide this graph with two weights: semanticity (semantic relation between subcharacter and character) and phoneticity (phonetic relation) and calculate "most semantic subcharacter paths" for each character. Finally, adding the information contained in these paths to unigrams we claim to increase the efficiency of text mining methods. We evaluate our method on a text classification task on two corpora (Chinese and Japanese) of a total of 18 million characters and get an improvement of 3% on an already high baseline of 89.6% precision, obtained by a linear SVM classifier. Other possible applications and perspectives of the system are discussed.Comment: 17 pages, 5 figures, presented at CICLing 201

The Dwarf Spheroidal Companions to M31: Variable Stars in Andromeda VI

We have surveyed Andromeda VI, a dwarf spheroidal galaxy companion to M31, for variable stars using F450W and F555W observations obtained with the Hubble Space Telescope. A total of 118 variables were found, with 111 being RR Lyrae, 6 anomalous Cepheids, and 1 variable we were unable to classify. We find that the Andromeda VI anomalous Cepheids have properties consistent with those of anomalous Cepheids in other dwarf spheroidal galaxies. We revise the existing period-luminosity relations for these variables. Further, using these and other available data, we show that there is no clear difference between fundamental and first-overtone anomalous Cepheids in a period-amplitude diagram at shorter periods, unlike the RR Lyrae. For the Andromeda VI RR Lyrae, we find that they lie close to the Oosterhoff type I Galactic globular clusters in the period-amplitude diagram, although the mean period of the RRab stars, = 0.588 d, is slightly longer than the typical Oosterhoff type I cluster. The mean V magnitude of the RR Lyrae in Andromeda VI is 25.29+/-0.03, resulting in a distance 815+/-25 kpc on the Lee, Demarque, & Zinn distance scale. This is consistent with the distance derived from the I magnitude of the tip of the red giant branch. Similarly, the properties of the RR Lyrae indicate a mean abundance for Andromeda VI which is consistent with that derived from the mean red giant branch color.Comment: 23 pages, including 13 figures and 6 tables, emulateapj5/apjfonts style. Accepted by the Astronomical Journal. We recommend the interested reader to download the preprint with full-resolution figures, which can be found at http://www.noao.edu/noao/staff/pritzl/M31dwarfs.htm